CRUK-CI Genomics Help

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submission:single-cell_faq [2025/02/13 18:26] – [When can I submit my samples?] Bioinformatics service adminsubmission:single-cell_faq [2025/02/13 18:31] (current) – [What is the price of 10x experiments?] Bioinformatics service admin
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   - [[https://genomicsequencing.cruk.cam.ac.uk/sequencing/login/CreateUser.action|Request a user account for the sequencing service]] which will allow you to upload a submission form around time of experiment.   - [[https://genomicsequencing.cruk.cam.ac.uk/sequencing/login/CreateUser.action|Request a user account for the sequencing service]] which will allow you to upload a submission form around time of experiment.
   - [[:genomics-helpdesk@cruk.cam.ac.uk|Contact us]] to set up your grant code in PPMS. Sometimes it takes up to few weeks to get financial part sorted out so we recommend to send us details as soon as possible.   - [[:genomics-helpdesk@cruk.cam.ac.uk|Contact us]] to set up your grant code in PPMS. Sometimes it takes up to few weeks to get financial part sorted out so we recommend to send us details as soon as possible.
-  - In rare cases when the research group you belong to have never worked with us in the past (especially if your PI just joined the institute) we may need to set up a PPMS account (different to adding your individual grant code) and FTP account. Please [[:genomics-helpdesk@cruk.cam.ac.uk|contact us]] to check if we have your PI's details in the system.+  - In rare cases, when the research group you belong to have never worked with us in the past (especially if your PI just joined the institute), we may need to set up a PPMS account (different to adding your individual grant code) and an FTP account. Please [[:genomics-helpdesk@cruk.cam.ac.uk|contact us]] to check if we have your PI's details in the system.
   - Fill in a [[https://genomicsequencing.cruk.cam.ac.uk/sequencing/forms/DownloadForm.action|submission form]] and upload it to your project. For help filling in the submission form please follow [[https://genomicshelp.cruk.cam.ac.uk/doku.php?id=submission:10x_submissions|this guide]].   - Fill in a [[https://genomicsequencing.cruk.cam.ac.uk/sequencing/forms/DownloadForm.action|submission form]] and upload it to your project. For help filling in the submission form please follow [[https://genomicshelp.cruk.cam.ac.uk/doku.php?id=submission:10x_submissions|this guide]].
  
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 This will depend on the chemistry you would like to use & the number of samples you are hoping to submit. This will depend on the chemistry you would like to use & the number of samples you are hoping to submit.
  
-Please contact [[:singlecell@cruk.cam.ac.uk|singlecell ]] & ask for a price card for up to date information on our prices for sequencing & single cell.+Please contact [[:singlecell@cruk.cam.ac.uk|Single Cell Team]] & ask for a price card for up to date information on our prices for sequencing & single cell.
  
 **Please note:** **Please note:**
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 We recommend discussing this matter with your bioinformatician.  We recommend discussing this matter with your bioinformatician. 
  
-If you would like an indication on how much your experiment might cost for 10X library prep & sequencing please get in contact with the[[:singlecell@cruk.cam.ac.uk|team]] & we'll put together a cost estimate for you based on your requirements (number of samples, chemistry, read depth etc.)+If you would like an indication on how much your experiment might cost for 10X library prep & sequencing please get in contact with the team & we'll put together a cost estimate for you based on your requirements (number of samples, chemistry, read depth etc.)