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submission:ont_submissions [2024/11/21 16:12] – [Complete the Pool Information Fields] Johanna Barbierisubmission:ont_submissions [2025/04/04 09:16] (current) Johanna Barbieri
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-====== Genomics Core Library Preparation Submission ======+====== Genomics Core ONT Sequencing Submission ======
  
 +The loading requirements for ONT sequencing can be found at the end of each library preparation protocol.
 +We ask that you submit at least those requirements (keeping in mind that the more we load the better the runs will be).
 +
 +If your libraries don't meet the ONT loading requirements, please contact us here [[:genomics-helpdesk@cruk.cam.ac.uk|Genomics Helpdesk]].
 +
 +You'll find ONT library preparation protocols [[https://nanoporetech.com/documentation/results?category=prepare&topic=library-prep-protocols|here]] and our own Library preparation guidelines [[submission:ont_submissions_lps|here]].
  
-^Library prep kit ^ Submit ^ Submission workflow ^ Quantity range (ng) ^ Volume required per prep (uL)* ^ Sample batch size** ^Notes^ 
-|Illumina Stranded mRNA|Total RNA|Illumina Stranded mRNA|25-1000|25|Any number|This kit supports various input mass; normalise where possible.| 
-|NEBNext Single cell / low input RNA Library Prep Kit for Illumina|Total RNA/cells|NEB low input RNA|2pg - 200ng, or cell(s)|8|24|Please discuss your input requirements prior to submission.| 
-|Illumina DNA PCR-Free Library Prep, Tagmentation|Genomic DNA|Illumina DNA PCR Free, Tag|25-2000|30|24|This kit provides a "low-input" protocol for small input mass. It will also self-normalise samples above 300 ng.| 
-|Illumina DNA Prep with Enrichment|Genomic DNA|Illumina DNA Prep with Enrichment|100-500|30|16?|Also suitable for FFPE extracted material using a modified protocol.| 
-|ThruPLEX DNA-Seq?|ChIP'ed DNA|Thruplex DNA Seq?|5-200?|30|24| 
-|Watchmaker RNA with Polaris depletion| Total RNA| Other| 1-1000| 11?| Any number|Also suitable for FFPE extracted material using a modified protocol.|\\ 
-Please provide an additional 15% volume per well.\\ 
-We run a positive and negative control with every library prep. 
  
  
-==== Complete the Pool Information Fields ==== 
  
- - tesdt